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  • Top cofit genes for PP_4255 from Pseudomonas putida KT2440

    cytochrome c oxidase subunit I, cbb3-type
    SEED: Cytochrome c oxidase subunit CcoN (EC 1.9.3.1)
    KEGG: cb-type cytochrome c oxidase subunit I

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0413 Polyamine ABC transporter, permease protein 0.32 0.31
    2 PP_4256 cytochrome c oxidase subunit, cbb3-type 0.96 0.30
    3 PP_4259 Iron-sulfur cluster-binding protein 0.87 0.29
    4 PP_3603 Transcriptional regulator, GntR family 0.46 0.29
    5 PP_3925 conserved protein of unknown function no 0.27
    6 PP_4258 cytochrome c oxidase subunit, cbb3-type 0.97 0.27
    7 PP_2436 Transcriptional regulator, LysR family no 0.26
    8 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) 0.32 0.26
    9 PP_2019 adhesin-associated MmpL efflux pump (from data) no 0.26
    10 PP_0767 Transcriptional regulator, LuxR family no 0.25
    11 PP_0125 putative cytochrome c-type protein 0.37 0.25
    12 PP_2868 Transcriptional regulator, Cro/CI family no 0.25
    13 PP_4320 cytochrome c-type biogenesis protein 0.74 0.25
    14 PP_0356 malate synthase G 0.35 0.25
    15 PP_0126 Cytochrome c4 0.86 0.24
    16 PP_1941 conserved protein of unknown function no 0.24
    17 PP_4695 Sensory box histidine kinase 0.77 0.24
    18 PP_4722 Transcription elongation factor GreA no 0.23
    19 PP_0414 Polyamine ABC transporter, permease protein 0.29 0.23
    20 PP_3300 Transcriptional regulator, tetR family no 0.23

    Or look for negative cofitness