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  • Top cofit genes for PP_4247 from Pseudomonas putida KT2440

    Exonuclease
    SEED: Inhibitor of the KinA pathway to sporulation, predicted exonuclease

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0242 Transcriptional regulator, TetR family no 0.18
    2 PP_0092 putative lipoprotein 0.38 0.17
    3 PP_0185 Positive alginate biosynthesis regulatory protein 0.52 0.16
    4 PP_2338 2-methylcitrate dehydratase 0.61 0.15
    5 PP_3840 conserved protein of unknown function no 0.15
    6 PP_2433 conserved protein of unknown function no 0.14
    7 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily no 0.14
    8 PP_4401 branched-chain alpha-keto acid dehydrogenase complex, alpha subunit no 0.14
    9 PP_4400 Bkd operon transcriptional regulator no 0.14
    10 PP_1242 conserved protein of unknown function 0.11 0.14
    11 PP_2245 Transcriptional regulator, Cro/CI family no 0.14
    12 PP_5191 conserved exported protein of unknown function 0.54 0.14
    13 PP_3073 3-hydroxybutyrate dehydrogenase no 0.14
    14 PP_0248 Probable alpha-L-glutamate ligase 0.29 0.14
    15 PP_1828 conserved protein of unknown function 0.18 0.14
    16 PP_5572 protein of unknown function no 0.14
    17 PP_4793 conserved protein of unknown function 0.57 0.13
    18 PP_3743 conserved exported protein of unknown function no 0.13
    19 PP_1185 Outer membrane protein H1 no 0.13
    20 PP_5554 protein of unknown function no 0.13

    Or look for negative cofitness