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Cofit
Protein
Homologs
Top cofit genes for PP_4246 from
Pseudomonas putida KT2440
Periplasmic binding protein
SEED: Periplasmic binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1656
ATP:GTP 3'-pyrophosphotransferase
0.43
0.38
2
PP
_1655
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
no
0.38
3
PP
_1650
Sensor protein GacS
0.89
0.34
4
PP
_4099
two-componenent system BarA/UvrY - regulatory subunit
0.89
0.33
5
PP
_0049
conserved protein of unknown function
no
0.31
6
PP
_5603
putative FAD dependent oxidoreductase
no
0.30
7
PP
_4243
non-ribosomal peptide synthase (subunit of ferribactin synthase)
no
0.30
8
PP
_4050
glycogen synthase
0.83
0.30
9
PP
_4405
Sensory box protein
no
0.30
10
PP
_0672
Sensory box protein
no
0.29
11
PP
_4171
conserved exported protein of unknown function
0.77
0.29
12
PP
_4412
conserved protein of unknown function
no
0.28
13
PP
_4434
D-amino acid dehydrogenase 1 small subunit
no
0.28
14
PP
_2413
GGDEF family protein
no
0.28
15
PP
_4429
Transcriptional regulator, GntR family
no
0.28
16
PP
_4217
outer membrane ferripyoverdine receptor FpvA, TonB-dependent
no
0.27
17
PP
_0210
putative Phycobiliprotein
no
0.27
18
PP
_4300
putative hydroxypyruvate reductase
no
0.27
19
PP
_4959
diguanylate cyclase
0.43
0.26
20
PP
_4461
Major facilitator family transporter
no
0.26
Or look for
negative cofitness