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  • Top cofit genes for PP_4233 from Pseudomonas putida KT2440

    putative Oxidoreductase, small subunit
    SEED: Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1109 Transcriptional regulator, GntR family no 0.17
    2 PP_3790 diaminopimelate epimerase no 0.17
    3 PP_3376 putative phosphonate dehydrogenase no 0.17
    4 PP_2758 putative Ribose ABC transporter, periplasmic ribose-binding protein no 0.16
    5 PP_5233 ammonium transporter AmtB no 0.16
    6 PP_5488 conserved protein of unknown function no 0.16
    7 PP_4232 Cytochrome c family protein 0.21 0.16
    8 PP_3788 putative Non-ribosomal peptide synthetase no 0.16
    9 PP_3647 putative Oxidoreductase no 0.15
    10 PP_0841 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR no 0.15
    11 PP_1111 putative Synthetase no 0.15
    12 PP_2689 putative Endoribonuclease no 0.15
    13 PP_2580 conserved protein of unknown function no 0.15
    14 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.15
    15 PP_1110 serine acetyltransferase no 0.15
    16 PP_1280 Probable alginate O-acetylase AlgI no 0.15
    17 PP_5061 Choline transporter no 0.15
    18 PP_4924 Serine protease, subtilase family no 0.15
    19 PP_0788 conserved protein of unknown function no 0.15
    20 PP_4927 Cyclolysin secretion/processing ATP-binding protein CyaB no 0.15

    Or look for negative cofitness