Top cofit genes for PP_4224 from Pseudomonas putida KT2440

Sensor histidine kinase
SEED: Sensor histidine kinase
KEGG: two-component system, OmpR family, sensor kinase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2025		Exonuclease SbcD	no	0.22
2	PP_2036		putative 4-hydroxy-tetrahydrodipicolinate synthase	no	0.22
3	PP_5144		conserved protein of unknown function	0.48	0.20
4	PP_3763		putative CobF protein	0.20	0.19
5	PP_1655		23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	0.57	0.19
6	PP_2040		Major facilitator family transporter	no	0.19
7	PP_3635		putative Sulfonate ABC transporter, permease protein	no	0.19
8	PP_3950		Methyl-accepting chemotaxis transducer	no	0.19
9	PP_4080		conserved protein of unknown function	no	0.19
10	PP_3001		CAIB/BAIF family protein	no	0.18
11	PP_3744		transcriptional dual regulator GlcC-Glycolate	no	0.18
12	PP_3632		Transcriptional regulator, LysR family	no	0.18
13	PP_1824		Smr domain protein	no	0.18
14	PP_2604		major facilitator family transporter	no	0.18
15	PP_2210		LysR family transcriptional regulator	no	0.18
16	PP_0239		aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate	no	0.18
17	PP_0784		conserved protein of unknown function	no	0.17
18	PP_5153		putative isomerase/hydrolase	0.73	0.17
19	PP_2034		conserved membrane protein of unknown function	no	0.17
20	PP_5229		conserved protein of unknown function	no	0.17

Or look for negative cofitness