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Cofit
Protein
Homologs
Top cofit genes for PP_4222 from
Pseudomonas putida KT2440
putative SyrP protein
SEED: SyrP-like protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4219
non-ribosomal peptide synthetase
no
0.38
2
PP
_4220
non-ribosomal peptide synthetase (subunit of ferribactin synthase)
no
0.37
3
PP
_4221
non-ribosomal peptide synthetase (subunit of ferribactin synthase)
no
0.37
4
PP
_4243
non-ribosomal peptide synthase (subunit of ferribactin synthase)
0.24
0.36
5
PP
_2750
putative Branched-chain amino acid ABC transporter, permease protein
no
0.21
6
PP
_5222
adenylate cyclase
0.29
0.21
7
PP
_2851
conserved protein of unknown function
0.33
0.21
8
PP
_0205
putative Oxidoreductase
no
0.21
9
PP
_5242
Sensor histidine kinase/GAF domain protein
no
0.20
10
PP
_3796
L-ornithine 5-monooxygenase
no
0.19
11
PP
_4232
Cytochrome c family protein
0.58
0.18
12
PP
_4246
Periplasmic binding protein
no
0.18
13
PP
_5716
conserved protein of unknown function
no
0.17
14
PP
_3949
HTH-type transcriptional repressor NicS
0.52
0.17
15
PP
_4245
hydroxyproline acetylase
no
0.17
16
PP
_1876
putative ATP/GTP-binding protein of the AAA+ family
no
0.17
17
PP
_0337
Sensory box protein
no
0.17
18
PP
_5632
enzyme subunit involved in allo-isoleucine metabolism
no
0.17
19
PP
_2347
DNA-binding response regulator
no
0.17
20
PP
_0788
conserved protein of unknown function
0.40
0.17
Or look for
negative cofitness