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  • Top cofit genes for PP_4215 from Pseudomonas putida KT2440

    pyoverdine biosynthesis related protein
    SEED: PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4213 putative dipeptidase 0.55 0.45
    2 PP_4214 pyoverdine biosynthesis related protein 0.63 0.43
    3 PP_0495 type 1 L-asparaginase no 0.36
    4 PP_4860 putative Mannose-6-phosphate isomerase 0.36 0.34
    5 PP_3330 putative Outer membrane ferric siderophore receptor 0.24 0.34
    6 PP_2379 putative cytochrome oxidase biogenesis protein no 0.31
    7 PP_4210 pyoverdine efflux carrier and ATP binding protein 0.56 0.30
    8 PP_4942 conserved protein of unknown function 0.78 0.30
    9 PP_5053 Protein-export protein SecB 0.34 0.29
    10 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) no 0.28
    11 PP_4162 conserved membrane protein of unknown function 0.61 0.27
    12 PP_0908 conserved exported protein of unknown function 0.39 0.27
    13 PP_1001 arginine deiminase no 0.27
    14 PP_4944 Carbamoyltransferase 0.32 0.27
    15 PP_4209 ABC export system, membrane fusion protein 0.48 0.26
    16 PP_0180 putative cytochrome c family protein no 0.26
    17 PP_3803 putative Cation ABC transporter, permease protein 0.31 0.25
    18 PP_4941 conserved exported protein of unknown function 0.14 0.25
    19 PP_3128 putative Exopolysaccharide biosynthesis/transport protein no 0.24
    20 PP_3801 putative Cation ABC transporter, periplasmic cation-binding protein 0.46 0.24

    Or look for negative cofitness