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Cofit
Protein
Homologs
Top cofit genes for PP_4198 from
Pseudomonas putida KT2440
OmpA family protein
SEED: OmpA family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1204
putative Lipoprotein
0.94
0.69
2
PP
_1798
Outer membrane efflux protein
no
0.62
3
PP
_1627
conserved protein of unknown function
no
0.61
4
PP
_2148
transcription-repair coupling factor
no
0.59
5
PP
_0066
Ribosomal RNA small subunit methyltransferase B
0.38
0.59
6
PP
_1663
conserved exported protein of unknown function
0.19
0.57
7
PP
_1871
Protease HtpX
0.44
0.57
8
PP
_0725
conserved hypothetical TPR repeat protein
0.85
0.56
9
PP
_1774
conserved exported protein of unknown function
no
0.56
10
PP
_0540
conserved inner membrane protein
0.87
0.55
11
PP
_5058
Carboxy-terminal-processing protease
0.84
0.55
12
PP
_3627
conserved protein of unknown function
no
0.52
13
PP
_5113
predicted Zn-dependent peptidases
0.85
0.52
14
PP
_5283
periplasmic dipeptide transport protein
0.46
0.51
15
PP
_1777
phosphomannomutase
no
0.50
16
PP
_1797
HlyD family secretion protein
no
0.50
17
PP
_2032
putative ATPase
0.85
0.49
18
PP
_1770
3-phosphoshikimate 1-carboxyvinyltransferase
0.66
0.49
19
PP
_2027
conserved exported protein of unknown function
0.76
0.48
20
PP
_0789
N-acetyl-anhydromuramyl-L-alanine-amidase
0.74
0.48
Or look for
negative cofitness