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  • Top cofit genes for PP_4173 from Pseudomonas putida KT2440

    Sensor histidine kinase/response regulator
    SEED: Sensor histidine kinase/response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4172 conserved exported protein of unknown function 0.85 0.83
    2 PP_4171 conserved exported protein of unknown function 0.99 0.72
    3 PP_1650 Sensor protein GacS 0.92 0.50
    4 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.93 0.49
    5 PP_1113 Pyridoxal-phosphate dependent enzyme family protein no 0.48
    6 PP_5053 Protein-export protein SecB 0.53 0.46
    7 PP_1663 conserved exported protein of unknown function no 0.45
    8 PP_4100 Transcriptional regulator, Cro/CI family no 0.41
    9 PP_1626 DNA mismatch repair protein MutS 0.74 0.41
    10 PP_2889 putative Transmembrane regulator PrtR 0.25 0.40
    11 PP_3831 conserved protein of unknown function no 0.40
    12 PP_2148 transcription-repair coupling factor 0.35 0.39
    13 PP_5058 Carboxy-terminal-processing protease 0.58 0.39
    14 PP_1761 diguanylate cyclase with phosphodiesterase domain 0.28 0.39
    15 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily no 0.38
    16 PP_0725 conserved hypothetical TPR repeat protein 0.57 0.38
    17 PP_4896 DNA mismatch repair protein MutL 0.58 0.38
    18 PP_4629 Sensory box protein no 0.37
    19 PP_2387 conserved protein of unknown function no 0.36
    20 PP_0574 DNA-binding response regulator, LuxR family 0.55 0.36

    Or look for negative cofitness