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  • Top cofit genes for PP_4172 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: FIG00953467: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4173 Sensor histidine kinase/response regulator 0.85 0.83
    2 PP_4171 conserved exported protein of unknown function 0.87 0.62
    3 PP_1113 Pyridoxal-phosphate dependent enzyme family protein no 0.47
    4 PP_2148 transcription-repair coupling factor 0.72 0.45
    5 PP_1663 conserved exported protein of unknown function 0.44 0.44
    6 PP_5053 Protein-export protein SecB 0.51 0.42
    7 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.64 0.40
    8 PP_2098 D-alanyl-D-alanine carboxypeptidase no 0.40
    9 PP_0405 conserved protein of unknown function 0.63 0.39
    10 PP_5283 periplasmic dipeptide transport protein 0.49 0.39
    11 PP_1036 membrane-bound lytic murein transglycosylase F no 0.39
    12 PP_1627 conserved protein of unknown function no 0.38
    13 PP_1650 Sensor protein GacS 0.58 0.37
    14 PP_5058 Carboxy-terminal-processing protease 0.69 0.37
    15 PP_1871 Protease HtpX no 0.37
    16 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.61 0.37
    17 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) 0.56 0.37
    18 PP_0540 conserved inner membrane protein no 0.37
    19 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.41 0.36
    20 PP_1798 Outer membrane efflux protein no 0.36

    Or look for negative cofitness