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Cofit
Protein
Homologs
Top cofit genes for PP_4164 from
Pseudomonas putida KT2440
Alpha/beta hydrolase
SEED: hydrolase, alpha/beta fold family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4948
Acyl-CoA dehydrogenase family protein
no
0.39
2
PP
_3923
Phosphoglycerate mutase
no
0.34
3
PP
_2436
Transcriptional regulator, LysR family
0.48
0.32
4
PP
_3925
conserved protein of unknown function
0.26
0.32
5
PP
_5109
membrane component of the ABC transporter FtsEX involved in cellular division
0.34
0.30
6
PP
_1328
Protein MraZ
no
0.29
7
PP
_4840
D-alanine, beta-alanine, D-serine, glycine permease
no
0.26
8
PP
_4266
Adenine phosphoribosyltransferase
no
0.26
9
PP
_0767
Transcriptional regulator, LuxR family
0.30
0.25
10
PP
_5057
Peptidase, M23/M37 family
0.28
0.24
11
PP
_0997
Sigma-54 dependent transcriptional regulator/sensory box protein
no
0.23
12
PP
_1941
conserved protein of unknown function
no
0.23
13
PP
_0370
Acyl-CoA dehydrogenase family protein
0.55
0.22
14
PP
_4165
conserved protein of unknown function
no
0.22
15
PP
_4550
long-chain-fatty-acid/CoA ligase
0.22
0.22
16
PP
_1301
quality control serine endoprotease DegS
no
0.20
17
PP
_2354
Sensory box histidine kinase/response regulator
no
0.19
18
PP
_2137
beta-ketoadipyl CoA thiolase, beta component
no
0.19
19
PP
_0428
aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase
no
0.19
20
PP
_2018
adhesin-associated BNR repeat protein
(from data)
no
0.19
Or look for
negative cofitness