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  • Top cofit genes for PP_4163 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.22
    2 PP_4585 RNA methyltransferase, TrmH family no 0.21
    3 PP_1301 quality control serine endoprotease DegS no 0.20
    4 PP_5605 conserved exported protein of unknown function no 0.20
    5 PP_1072 Leucine-rich repeat domain protein no 0.20
    6 PP_5246 glutathione-regulated potassium/H+ antiporter 0.35 0.20
    7 PP_4686 putative lipoprotein no 0.19
    8 PP_1853 Transcriptional regulator, LysR family 0.42 0.19
    9 PP_2751 conserved exported protein of unknown function no 0.19
    10 PP_1051 Type II secretion pathway protein XcpV no 0.18
    11 PP_3420 Sensor histidine kinase no 0.18
    12 PP_2894 conserved protein of unknown function no 0.18
    13 PP_4530 conserved protein of unknown function no 0.18
    14 PP_1631 conserved protein of unknown function no 0.17
    15 PP_3725 putative Acyl-CoA dehydrogenase no 0.17
    16 PP_3175 putative Dioxygenase, ferredoxin reductase component no 0.17
    17 PP_3407 conserved protein of unknown function no 0.17
    18 PP_4495 aromatic amino acid transport protein no 0.17
    19 PP_1229 putrescine permease no 0.17
    20 PP_4911 conserved protein of unknown function 0.47 0.17

    Or look for negative cofitness