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  • Top cofit genes for PP_4162 from Pseudomonas putida KT2440

    conserved membrane protein of unknown function
    SEED: Putative membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1302 putative metal-binding hydrolase-oxidase enzyme no 0.40
    2 PP_2994 Oxidoreductase, FMN-binding no 0.33
    3 PP_0281 Amino acid ABC transporter, permease protein 0.26 0.33
    4 PP_3104 conserved protein of unknown function no 0.30
    5 PP_3722 Alanine racemase no 0.28
    6 PP_0691 Glutamate 5-kinase 0.74 0.28
    7 PP_4215 pyoverdine biosynthesis related protein 0.61 0.28
    8 PP_4999 dihydroorotase-like protein no 0.28
    9 PP_3340 putative TonB-dependent receptor no 0.28
    10 PP_4723 Carbamoyl-phosphate synthase large chain 0.27 0.28
    11 PP_3073 3-hydroxybutyrate dehydrogenase 0.79 0.27
    12 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein 0.26 0.27
    13 PP_2556 Chromate transporter 0.54 0.27
    14 PP_3717 Transcriptional regulator, LuxR family no 0.27
    15 PP_1498 putative Lipoprotein no 0.27
    16 PP_1867 conserved protein of unknown function no 0.26
    17 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.27 0.26
    18 PP_0887 Sensor histidine kinase no 0.26
    19 PP_2157 Sensor histidine kinase 0.79 0.25
    20 PP_2979 conserved protein of unknown function no 0.25

    Or look for negative cofitness