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  • Top cofit genes for PP_4131 from Pseudomonas putida KT2440

    NADH-quinone oxidoreductase subunit N
    SEED: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
    KEGG: NADH dehydrogenase I subunit N

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4124 NADH-quinone oxidoreductase subunit G 0.99 0.86
    2 PP_4121 NADH-quinone oxidoreductase subunit C/D 1.00 0.85
    3 PP_4120 NADH-quinone oxidoreductase subunit B 0.99 0.83
    4 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 1.00 0.81
    5 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M 0.99 0.79
    6 PP_4122 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E 0.97 0.68
    7 PP_4126 NADH-quinone oxidoreductase subunit I 0.99 0.66
    8 PP_4824 Sensor histidine kinase/response regulator 0.68 0.51
    9 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.48
    10 PP_5310 junction-specific ATP-dependent DNA helicase 0.39 0.47
    11 PP_2302 DNA-binding, ATP-dependent protease 0.73 0.46
    12 PP_4546 ATP-dependent helicase HrpA no 0.46
    13 PP_1629 Protein RecA 0.65 0.43
    14 PP_0368 putative Acyl-CoA dehydrogenase 0.63 0.43
    15 PP_4880 exoribonuclease R 0.95 0.43
    16 PP_0002 probable chromosome partition protein 0.62 0.42
    17 PP_4993 Glutathione synthetase 0.44 0.42
    18 PP_5028 proline iminopeptidase no 0.41
    19 PP_0393 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase no 0.40
    20 PP_2336 aconitate hydratase 1 0.89 0.40

    Or look for negative cofitness