• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PP_4116 from Pseudomonas putida KT2440

    isocitrate lyase
    SEED: Isocitrate lyase (EC 4.1.3.1)
    KEGG: isocitrate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5659 protein of unknown function no 0.92
    2 PP_0356 malate synthase G 0.99 0.91
    3 PP_5085 malic enzyme B 0.61 0.65
    4 PP_0248 Probable alpha-L-glutamate ligase 0.69 0.60
    5 PP_4549 long-chain-fatty-acid/CoA ligase 0.73 0.56
    6 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.97 0.52
    7 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.83 0.49
    8 PP_4565 Isocitrate dehydrogenase kinase/phosphatase 0.94 0.48
    9 PP_0368 putative Acyl-CoA dehydrogenase 0.99 0.47
    10 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.78 0.47
    11 PP_0370 Acyl-CoA dehydrogenase family protein 0.65 0.46
    12 PP_4550 long-chain-fatty-acid/CoA ligase 0.61 0.45
    13 PP_0767 Transcriptional regulator, LuxR family 0.26 0.42
    14 PP_2356 putative Phytochrome family protein 0.29 0.39
    15 PP_1941 conserved protein of unknown function no 0.39
    16 PP_2868 Transcriptional regulator, Cro/CI family no 0.38
    17 PP_4064 isovaleryl-CoA dehydrogenase 0.90 0.37
    18 PP_3123 acetoacetyl CoA-transferase (subunit B) 0.77 0.36
    19 PP_0763 Medium-chain-fatty-acid CoA ligase 0.88 0.36
    20 PP_0691 Glutamate 5-kinase 0.48 0.35

    Or look for negative cofitness