Top cofit genes for PP_4107 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4547		putative Glutamine synthetase	no	0.40
2	PP_5262		Probable multidrug resistance protein NorM	no	0.36
3	PP_4548		putative Oxidoreductase	no	0.35
4	PP_0567		Biosynthetic arginine decarboxylase	no	0.31
5	PP_1842		Glutamine amidotransferase, class I	no	0.30
6	PP_0266		Agmatine deiminase	0.58	0.28
7	PP_2932		Amidase family protein	no	0.25
8	PP_5212		Oxidoreductase, iron-sulfur-binding	no	0.25
9	PP_5096		putative factor involved in shape determination	no	0.25
10	PP_5300		Transcriptional regulator, LysR family	0.36	0.21
11	PP_3990		substrate or modulator of FtsH-mediated proteolysis	no	0.21
12	PP_5719		choline-responsive transcriptional repressor BetI	no	0.21
13	PP_1014		aldose-ketose isomerase	no	0.21
14	PP_4947		proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase	0.42	0.20
15	PP_1234		putative permease	0.22	0.19
16	PP_1758		putative sulfurtransferase containing rhodanese-like domain	0.11	0.19
17	PP_5184		glutamylpolyamine synthetase	0.16	0.19
18	PP_0247		Osmolarity sensor protein EnvZ	no	0.18
19	PP_1440		tRNA (mo5U34)-methyltransferase	0.68	0.18
20	PP_0597		methylmalonate-semialdehyde dehydrogenase	no	0.18

Or look for negative cofitness