Top cofit genes for PP_4100 from Pseudomonas putida KT2440

Transcriptional regulator, Cro/CI family
SEED: Transcriptional regulator, Cro/CI family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4171		conserved exported protein of unknown function	no	0.63
2	PP_3831		conserved protein of unknown function	no	0.58
3	PP_1113		Pyridoxal-phosphate dependent enzyme family protein	no	0.55
4	PP_1650		Sensor protein GacS	no	0.46
5	PP_4099		two-componenent system BarA/UvrY - regulatory subunit	no	0.45
6	PP_1112		conserved membrane protein of unknown function	0.35	0.44
7	PP_2231		putative permease of the drug/metabolite transporter (DMT) superfamily	no	0.43
8	PP_0574		DNA-binding response regulator, LuxR family	no	0.42
9	PP_4173		Sensor histidine kinase/response regulator	0.38	0.41
10	PP_1655		23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	no	0.41
11	PP_5053		Protein-export protein SecB	0.42	0.41
12	PP_5005		Poly(3-hydroxyalkanoate) polymerase 2	no	0.40
13	PP_2889		putative Transmembrane regulator PrtR	no	0.38
14	PP_0355		Response regulator	no	0.38
15	PP_1761		diguanylate cyclase with phosphodiesterase domain	0.20	0.38
16	PP_1656		ATP:GTP 3'-pyrophosphotransferase	0.18	0.38
17	PP_2387		conserved protein of unknown function	no	0.37
18	PP_0719		ribosome-associated potassium-dependent informational ATP/GTPase	no	0.33
19	PP_5003		poly(3-hydroxyalkanoate) polymerase 1	no	0.32
20	PP_1783		dTDP-glucose pyrophosphorylase	0.51	0.32

Or look for negative cofitness