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  • Top cofit genes for PP_4098 from Pseudomonas putida KT2440

    UvrABC system protein C
    SEED: Excinuclease ABC subunit C
    KEGG: excinuclease ABC subunit C

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.90 0.29
    2 PP_5310 junction-specific ATP-dependent DNA helicase 0.92 0.28
    3 PP_4880 exoribonuclease R 0.40 0.28
    4 PP_1733 membrane ATPase of the MinC-MinD-MinE system 0.83 0.27
    5 PP_1734 Probable septum site-determining protein MinC 0.61 0.26
    6 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.58 0.26
    7 PP_4693 RNA polymerase-binding transcription factor DksA 0.71 0.26
    8 PP_3649 Transcriptional regulator, GntR family 0.50 0.26
    9 PP_1353 conserved membrane protein of unknown function 0.57 0.26
    10 PP_3248 Dyp-type peroxidase family protein 0.46 0.26
    11 PP_1629 Protein RecA 0.77 0.25
    12 PP_4993 Glutathione synthetase 0.54 0.25
    13 PP_1428 Sigma factor AlgU negative regulatory protein no 0.24
    14 PP_0852 Transcriptional regulator, Cro/CI family 0.57 0.24
    15 PP_1783 dTDP-glucose pyrophosphorylase 0.89 0.24
    16 PP_0949 putative ATP-binding protein UPF0042 0.57 0.23
    17 PP_0368 putative Acyl-CoA dehydrogenase 0.59 0.23
    18 PP_0123 DNA polymerase I, 5 0.72 0.23
    19 PP_0856 conserved lipoprotein of unknown function 0.50 0.22
    20 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.22

    Or look for negative cofitness