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  • Top cofit genes for PP_4081 from Pseudomonas putida KT2440

    putative type 4/6 secretion system
    SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
    KEGG: type VI secretion system protein ImpK

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3662 conserved protein of unknown function no 0.17
    2 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase no 0.17
    3 PP_4848 Curved DNA-binding protein no 0.16
    4 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine no 0.15
    5 PP_5194 aminomethyltransferase no 0.15
    6 PP_3249 putative oxidoreductase no 0.14
    7 PP_4630 Transcriptional regulator, MerR family no 0.14
    8 PP_5015 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) no 0.14
    9 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase no 0.14
    10 PP_0575 conserved membrane protein of unknown function no 0.14
    11 PP_1475 CAIB/BAIF family protein no 0.14
    12 PP_1611 2-dehydro-3-deoxyphosphooctonate aldolase no 0.14
    13 PP_1025 2-isopropylmalate synthase no 0.14
    14 PP_1304 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase no 0.14
    15 PP_0800 conserved protein of unknown function no 0.13
    16 PP_0043 cation efflux system protein no 0.13
    17 PP_2517 porin-like protein no 0.13
    18 PP_3789 putative Efflux transporter no 0.13
    19 PP_4364 putative Anti-sigma F factor antagonist no 0.13
    20 PP_0033 putative undecaprenyl-glycosyl transferase no 0.13

    Or look for negative cofitness