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  • Top cofit genes for PP_4078 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Uncharacterized protein ImpH/VasB
    KEGG: type VI secretion system protein ImpH

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.35
    2 PP_3790 diaminopimelate epimerase no 0.32
    3 PP_3788 putative Non-ribosomal peptide synthetase no 0.31
    4 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase no 0.31
    5 PP_1109 Transcriptional regulator, GntR family no 0.31
    6 PP_4922 Phosphomethylpyrimidine synthase no 0.31
    7 PP_1110 serine acetyltransferase no 0.31
    8 PP_1111 putative Synthetase no 0.29
    9 PP_3787 conserved protein of unknown function no 0.29
    10 PP_4723 Carbamoyl-phosphate synthase large chain 0.29 0.29
    11 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer no 0.28
    12 PP_5104 thiazole synthase no 0.28
    13 PP_4421 putative aminotransferase no 0.27
    14 PP_1988 3-isopropylmalate dehydrogenase no 0.27
    15 PP_4678 Ketol-acid reductoisomerase no 0.27
    16 PP_0420 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex no 0.27
    17 PP_0965 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) no 0.27
    18 PP_3786 aminotransferase no 0.27
    19 PP_4890 ATP phosphoribosyltransferase regulatory subunit no 0.27
    20 PP_4724 Carbamoyl-phosphate synthase small chain 0.54 0.27

    Or look for negative cofitness