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  • Top cofit genes for PP_4074 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Uncharacterized protein ImpB
    KEGG: type VI secretion system protein ImpB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1475 CAIB/BAIF family protein no 0.22
    2 PP_1582 conserved protein of unknown function no 0.19
    3 PP_4571 cysteine synthase A 0.60 0.19
    4 PP_1756 conserved exported protein of unknown function 0.31 0.18
    5 PP_2021 L-alpha-hydroxyglutaric acid gamma-lactonase 0.18 0.18
    6 PP_4270 conserved exported protein of unknown function no 0.18
    7 PP_5603 putative FAD dependent oxidoreductase no 0.17
    8 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.17
    9 PP_3175 putative Dioxygenase, ferredoxin reductase component no 0.17
    10 PP_1630 Regulatory protein RecX no 0.16
    11 PP_3065 Pyocin R2_PP, tail formation 0.35 0.16
    12 PP_4498 Segregation and condensation protein A no 0.16
    13 PP_4862 3-hydroxy acid dehydrogenase, NADP-dependent / malonic semialdehyde reductase no 0.16
    14 PP_3384 gluconate 2-dehydrogenase gamma subunit no 0.16
    15 PP_1637 Transcriptional regulator, LysR family no 0.16
    16 PP_2259 putative sigma-54 dependent transcriptional regulator no 0.16
    17 PP_4297 glyoxylate carboligase no 0.15
    18 PP_4279 xanthine dehydrogenase subunit XdhB no 0.15
    19 PP_4319 conserved exported protein of unknown function no 0.14
    20 PP_0530 3,4-dihydroxy-2-butanone 4-phosphate synthase no 0.14

    Or look for negative cofitness