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  • Top cofit genes for PP_4072 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Uncharacterized protein ImpA
    KEGG: type VI secretion system protein VasJ

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4211 outer membrane pyoverdine efflux protein no 0.17
    2 PP_2556 Chromate transporter no 0.16
    3 PP_2741 conserved membrane protein of unknown function no 0.15
    4 PP_2428 Probable sugar efflux transporter no 0.15
    5 PP_5288 Phosphomannomutase/phosphoglucomutase no 0.15
    6 PP_2098 D-alanyl-D-alanine carboxypeptidase no 0.15
    7 PP_3466 putative ABC efflux transporter, permease/ATP-binding protein no 0.14
    8 PP_3527 Transcriptional regulator, TetR family no 0.14
    9 PP_4586 conserved exported protein of unknown function no 0.14
    10 PP_2406 putative quinate/shikimate dehydrogenase no 0.14
    11 PP_1452 MutT/nudix family protein no 0.13
    12 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily no 0.13
    13 PP_3917 conserved protein of unknown function no 0.13
    14 PP_4775 conserved protein of unknown function no 0.13
    15 PP_0205 putative Oxidoreductase no 0.13
    16 PP_2726 conserved membrane protein of unknown function no 0.13
    17 PP_4626 holin regulator of murein hydrolases no 0.12
    18 PP_2693 putative Dipeptidase no 0.12
    19 PP_4855 Osmotically-inducible lipoprotein OsmE no 0.12
    20 PP_0240 Aliphatic sulfonates import ATP-binding protein SsuB no 0.12

    Or look for negative cofitness