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  • Top cofit genes for PP_4071 from Pseudomonas putida KT2440

    conserved membrane protein of unknown function
    SEED: IcmF-related protein
    KEGG: type VI secretion system protein ImpL

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.19
    2 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase no 0.18
    3 PP_0405 conserved protein of unknown function no 0.18
    4 PP_3997 putative Glycosyl transferase no 0.18
    5 PP_2364 conserved protein of unknown function no 0.18
    6 PP_4371 two component system AtoC DNA-binding transcriptional activator no 0.18
    7 PP_4372 Sensory box histidine kinase FleS no 0.18
    8 PP_4515 Transcriptional regulator, MarR family no 0.17
    9 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.62 0.17
    10 PP_1650 Sensor protein GacS 0.61 0.17
    11 PP_2184 putative Formate dehydrogenase, beta subunit no 0.17
    12 PP_1798 Outer membrane efflux protein no 0.17
    13 PP_3627 conserved protein of unknown function no 0.16
    14 PP_1764 Phosphoglycolate phosphatase 2 no 0.16
    15 PP_5304 putative Lipoprotein no 0.16
    16 PP_0725 conserved hypothetical TPR repeat protein no 0.16
    17 PP_4529 conserved protein of unknown function no 0.16
    18 PP_0042 conserved exported protein of unknown function no 0.16
    19 PP_1355 Muropeptide permease AmpG no 0.16
    20 PP_1626 DNA mismatch repair protein MutS no 0.16

    Or look for negative cofitness