Top cofit genes for PP_4068 from Pseudomonas putida KT2440

Transcriptional regulator, Cro/CI family
SEED: cI

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0506		putative ABC efflux transporter, permease protein	0.53	0.22
2	PP_5206		putative translation-related protein	no	0.22
3	PP_3376		putative phosphonate dehydrogenase	no	0.21
4	PP_3476		Type II secretion system protein G	no	0.18
5	PP_0893		ThiJ/PfpI family protein	no	0.18
6	PP_2714		Sensor histidine kinase	no	0.18
7	PP_1018		mannose/glucose ABC transporter - ATP binding subunit	0.35	0.18
8	PP_2785		conserved exported protein of unknown function	no	0.18
9	PP_2546		conserved membrane protein of unknown function	no	0.17
10	PP_1009		glyceraldehyde-3-phosphate dehydrogenase	no	0.17
11	PP_4461		Major facilitator family transporter	no	0.17
12	PP_3452		GGDEF domain protein	no	0.17
13	PP_4428		Amino acid ABC transporter, periplasmic amino acid-binding protein	no	0.16
14	PP_0971		conserved protein of unknown function	0.53	0.16
15	PP_3933		conserved membrane protein of unknown function	no	0.16
16	PP_2646		conserved protein of unknown function	no	0.16
17	PP_1012		DNA-binding response regulator	no	0.16
18	PP_1731		23S rRNA (746) and tRNA (32) pseudouridine synthase	0.56	0.16
19	PP_2501		putative phage integrase	no	0.16
20	PP_0237		aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate	no	0.15

Or look for negative cofitness