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  • Top cofit genes for PP_4058 from Pseudomonas putida KT2440

    1,4-alpha-glucan branching enzyme
    SEED: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
    KEGG: 1,4-alpha-glucan branching enzyme

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) no 0.46
    2 PP_4008 ATP-dependent serine protease 0.74 0.44
    3 PP_2433 conserved protein of unknown function no 0.43
    4 PP_0995 conserved membrane protein of unknown function no 0.41
    5 PP_1224 periplasmic subunit of the TolQRA transport system no 0.41
    6 PP_4143 conserved protein of unknown function 0.25 0.41
    7 PP_0951 Ribosome hibernation promoting factor 0.34 0.40
    8 PP_1778 Lipopolysaccharide ABC export system, permease protein 0.37 0.39
    9 PP_0002 probable chromosome partition protein 0.69 0.39
    10 PP_3649 Transcriptional regulator, GntR family 0.81 0.38
    11 PP_3833 Response regulator no 0.38
    12 PP_4060 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 0.86 0.37
    13 PP_4004 DNA translocase FtsK 0.58 0.37
    14 PP_5502 ribosome modulation factor no 0.37
    15 PP_4505 Sensor histidine kinase no 0.36
    16 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.42 0.36
    17 PP_0396 conserved protein of unknown function 0.57 0.36
    18 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein 0.38 0.36
    19 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.56 0.36
    20 PP_0395 putative type IV piliation protein 0.76 0.36

    Or look for negative cofitness