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  • Top cofit genes for PP_4057 from Pseudomonas putida KT2440

    conserved membrane protein of unknown function with autotransporter beta-domain
    SEED: outer membrane autotransporter

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4162 conserved membrane protein of unknown function no 0.22
    2 PP_2689 putative Endoribonuclease no 0.22
    3 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase no 0.22
    4 PP_0887 Sensor histidine kinase no 0.21
    5 PP_2871 Class II aldolase/adducin domain protein no 0.21
    6 PP_4690 Rieske 2Fe-2S family protein no 0.21
    7 PP_2097 Sensory box protein 0.26 0.21
    8 PP_1532 putative Phage integrase no 0.20
    9 PP_2749 putative Branched-chain amino acid ABC transporter, permease protein no 0.20
    10 PP_4342 flagellar synthesis regulator, putative ATPase no 0.20
    11 PP_4683 transglycosylase/transpeptidase no 0.20
    12 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase no 0.20
    13 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit no 0.20
    14 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit no 0.20
    15 PP_3050 conserved protein of unknown function no 0.20
    16 PP_3612 putative TonB-dependent receptor no 0.19
    17 PP_2379 putative cytochrome oxidase biogenesis protein no 0.19
    18 PP_3340 putative TonB-dependent receptor no 0.19
    19 PP_4523 putative Agmatinase 0.27 0.19
    20 PP_0718 Sulfate transporter no 0.19

    Or look for negative cofitness