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  • Top cofit genes for PP_4041 from Pseudomonas putida KT2440

    putative glycoside hydrolase
    SEED: Glucoamylase (EC 3.2.1.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3719 Putrescine-binding periplasmic protein no 0.24
    2 PP_1824 Smr domain protein no 0.24
    3 PP_3208 Oxidoreductase, Pdr/VanB family no 0.23
    4 PP_2000 amidophosphoribosyl transferase 0.62 0.22
    5 PP_1894 glutathione S-transferase reducing arsenate to arsenite 0.43 0.22
    6 PP_2210 LysR family transcriptional regulator no 0.22
    7 PP_2937 putative Integrase no 0.21
    8 PP_4694 Glutamyl-Q tRNA(Asp) synthetase no 0.21
    9 PP_0355 Response regulator no 0.21
    10 PP_2025 Exonuclease SbcD 0.29 0.20
    11 PP_2782 Pyridoxalphosphate dependent aminotransferase, class III no 0.19
    12 PP_3342 nickel ABC transporter periplasmic binding protein no 0.19
    13 PP_0994 putative RNA polymerase sigma factor no 0.19
    14 PP_0300 putative metallopeptidase no 0.19
    15 PP_5522 protein of unknown function no 0.19
    16 PP_0553 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system no 0.19
    17 PP_0093 putative zinc protease protein no 0.19
    18 PP_1039 sec-independent protein translocase protein no 0.19
    19 PP_0348 conserved protein of unknown function no 0.19
    20 PP_t11 tRNA-Lys no 0.19

    Or look for negative cofitness