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  • Top cofit genes for PP_4033 from Pseudomonas putida KT2440

    Ribonuclease Z
    SEED: Ribonuclease Z (EC 3.1.26.11)
    KEGG: ribonuclease Z

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4544 conserved exported protein of unknown function no 0.21
    2 PP_1113 Pyridoxal-phosphate dependent enzyme family protein no 0.19
    3 PP_2146 helicase SNF2/RAD54 family no 0.19
    4 PP_4682 conserved protein of unknown function containing tetratricopeptide repeat domain no 0.18
    5 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.34 0.18
    6 PP_3654 leucine-responsive regulatory protein no 0.17
    7 PP_0856 conserved lipoprotein of unknown function no 0.17
    8 PP_2707 putative Exodeoxyribonuclease III 0.32 0.17
    9 PP_4172 conserved exported protein of unknown function 0.57 0.16
    10 PP_5358 conserved protein of unknown function no 0.16
    11 PP_4171 conserved exported protein of unknown function no 0.16
    12 PP_3451 conserved exported protein of unknown function no 0.16
    13 PP_1145 RNA polymerase-associated protein RapA 0.45 0.16
    14 PP_1206 basic-amino-acid specific porin OprD no 0.15
    15 PP_1238 putative Lipoprotein no 0.15
    16 PP_2943 putative Cytochrome c551 peroxidase no 0.15
    17 PP_3320 conserved protein of unknown function no 0.15
    18 PP_2269 putative N-acetylmuramoyl-L-alanine amidase no 0.15
    19 PP_1112 conserved membrane protein of unknown function no 0.15
    20 PP_5053 Protein-export protein SecB no 0.14

    Or look for negative cofitness