Top cofit genes for PP_4002 from Pseudomonas putida KT2440

DNA-dependent ATPase required for recombination
SEED: FIG065221: Holliday junction DNA helicase
KEGG: putative ATPase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0123		DNA polymerase I, 5	0.44	0.35
2	PP_1125		putative Helicase	0.78	0.32
3	PP_2160		NADPH-dependent 7-cyano-7-deazaguanine reductase	0.63	0.32
4	PP_4722		Transcription elongation factor GreA	no	0.30
5	PP_4546		ATP-dependent helicase HrpA	0.56	0.30
6	PP_0498		conserved protein of unknown function	no	0.29
7	PP_5294		Ribonuclease PH	0.65	0.28
8	PP_4475		succinylglutamate desuccinylase	0.58	0.27
9	PP_4880		exoribonuclease R	0.28	0.27
10	PP_5352		DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex	0.94	0.25
11	PP_0832		S-adenosylmethionine:tRNA ribosyltransferase-isomerase	0.59	0.25
12	PP_1786		putative Glycosyl transferase	no	0.25
13	PP_0214		4-aminobutyrate aminotransferase	no	0.25
14	PP_4379		Beta-ketoacyl-acyl-carrier-protein synthase I	no	0.25
15	PP_1994		tRNA pseudouridine (38-40)synthase	0.90	0.25
16	PP_1370		Glycosyl transferase, group 1 family protein	0.59	0.24
17	PP_2379		putative cytochrome oxidase biogenesis protein	no	0.24
18	PP_3957		choline/carnitine/betaine transporter BetTC	0.53	0.24
19	PP_1226		pre-queuosine 0 synthase	0.55	0.24
20	PP_1527		tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase)	0.93	0.24

Or look for negative cofitness