Top cofit genes for PP_3988 from Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00483682: hypothetical protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4027		conserved protein of unknown function	no	0.20
2	PP_1117		conserved protein of unknown function	no	0.16
3	PP_2075		conserved membrane protein of unknown function	no	0.16
4	PP_2701		Transcriptional regulator, LysR family	no	0.16
5	PP_5651		conserved protein of unknown function	0.71	0.16
6	PP_3518		conserved exported protein of unknown function	no	0.15
7	PP_2058		putative Porin	no	0.15
8	PP_1306		Pyocin S-type Killer domain protein	no	0.15
9	PP_5153		putative isomerase/hydrolase	no	0.15
10	PP_3524		conserved protein of unknown function	no	0.15
11	PP_1504		conserved protein of unknown function	no	0.15
12	PP_4465		putative Porin	no	0.15
13	PP_2974		putative sulfatase	no	0.14
14	PP_3678		conserved protein of unknown function	no	0.14
15	PP_0029		two component heavy metal response regulator	no	0.14
16	PP_1637		Transcriptional regulator, LysR family	no	0.14
17	PP_5536		conserved protein of unknown function with RHS repeat-associated core domain	no	0.14
18	PP_3847		Transcriptional regulator, LuxR family	no	0.14
19	PP_1871		Protease HtpX	no	0.14
20	PP_0015		putative transposon protein	no	0.14

Or look for negative cofitness