Top cofit genes for PP_3974 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2210		LysR family transcriptional regulator	no	0.23
2	PP_2782		Pyridoxalphosphate dependent aminotransferase, class III	no	0.23
3	PP_1580		conserved protein of unknown function	no	0.23
4	PP_2832		galactose-binding protein regulator	no	0.20
5	PP_4964		D-erythrose 4-phosphate dehydrogenase	no	0.20
6	PP_2933		GSH-dependent disulfide bond oxidoreductase	0.41	0.20
7	PP_2948		Transcriptional regulator, GntR family	no	0.19
8	PP_3635		putative Sulfonate ABC transporter, permease protein	no	0.19
9	PP_2025		Exonuclease SbcD	no	0.19
10	PP_5686		protein of unknown function	no	0.18
11	PP_0663		Transcriptional regulator, AsnC family	no	0.18
12	PP_3831		conserved protein of unknown function	0.38	0.18
13	PP_0650		conserved protein of unknown function	no	0.18
14	PP_4080		conserved protein of unknown function	no	0.18
15	PP_3770		conserved protein of unknown function	no	0.18
16	PP_5117		putative hydrolase	0.23	0.18
17	PP_0307		conserved exported protein of unknown function	no	0.18
18	PP_4895		tRNA dimethylallyltransferase	no	0.17
19	PP_2419		conserved membrane protein of unknown function DUF1624 family	no	0.17
20	PP_0705		DNA-3-methyladenine glycosylase	no	0.17

Or look for negative cofitness