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  • Top cofit genes for PP_3968 from Pseudomonas putida KT2440

    Sensor histidine kinase
    SEED: sensor histidine kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0669 Outer membrane ferric siderophore receptor 0.45 0.25
    2 PP_0024 putative membrane-associated metal-dependent hydrolase no 0.23
    3 PP_4162 conserved membrane protein of unknown function no 0.20
    4 PP_2994 Oxidoreductase, FMN-binding no 0.20
    5 PP_1881 conserved protein of unknown function no 0.20
    6 PP_0574 DNA-binding response regulator, LuxR family no 0.20
    7 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase no 0.19
    8 PP_0021 conserved hypothetical protein no 0.18
    9 PP_0804 Protein secretion ABC efflux system, permease and ATP-binding protein no 0.18
    10 PP_2146 helicase SNF2/RAD54 family no 0.18
    11 PP_1302 putative metal-binding hydrolase-oxidase enzyme no 0.18
    12 PP_0348 conserved protein of unknown function no 0.18
    13 PP_2979 conserved protein of unknown function no 0.17
    14 PP_0806 putative Surface adhesion protein no 0.17
    15 PP_0805 Outer membrane efflux protein no 0.17
    16 PP_2547 Transcriptional regulator, LysR family no 0.16
    17 PP_1781 putative O-acyltransferase no 0.16
    18 PP_1761 diguanylate cyclase with phosphodiesterase domain 0.37 0.16
    19 PP_3093 conserved protein of unknown function no 0.16
    20 PP_3734 putative ABC transporter, permease protein no 0.16

    Or look for negative cofitness