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Cofit
Protein
Homologs
Top cofit genes for PP_3968 from
Pseudomonas putida KT2440
Sensor histidine kinase
SEED: sensor histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0669
Outer membrane ferric siderophore receptor
0.45
0.25
2
PP
_0024
putative membrane-associated metal-dependent hydrolase
no
0.23
3
PP
_4162
conserved membrane protein of unknown function
no
0.20
4
PP
_2994
Oxidoreductase, FMN-binding
no
0.20
5
PP
_1881
conserved protein of unknown function
no
0.20
6
PP
_0574
DNA-binding response regulator, LuxR family
no
0.20
7
PP
_4654
tRNA/tmRNA (uracil-C(5))-methyltransferase
no
0.19
8
PP
_0021
conserved hypothetical protein
no
0.18
9
PP
_0804
Protein secretion ABC efflux system, permease and ATP-binding protein
no
0.18
10
PP
_2146
helicase SNF2/RAD54 family
no
0.18
11
PP
_1302
putative metal-binding hydrolase-oxidase enzyme
no
0.18
12
PP
_0348
conserved protein of unknown function
no
0.18
13
PP
_2979
conserved protein of unknown function
no
0.17
14
PP
_0806
putative Surface adhesion protein
no
0.17
15
PP
_0805
Outer membrane efflux protein
no
0.17
16
PP
_2547
Transcriptional regulator, LysR family
no
0.16
17
PP
_1781
putative O-acyltransferase
no
0.16
18
PP
_1761
diguanylate cyclase with phosphodiesterase domain
0.37
0.16
19
PP
_3093
conserved protein of unknown function
no
0.16
20
PP
_3734
putative ABC transporter, permease protein
no
0.16
Or look for
negative cofitness