Top cofit genes for PP_3954 from Pseudomonas putida KT2440

periplasmic binding subunit of unknown solute
SEED: TRAP transporter solute receptor, unknown substrate 1

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1063		DNA-binding transcriptional regulator, homocysteine-binding	no	0.18
2	PP_3509		Glyoxalase family protein	no	0.18
3	PP_0215		Response regulator	0.55	0.17
4	PP_5448		conserved protein of unknown function	no	0.17
5	PP_2640		Acetyltransferase, GNAT family	no	0.17
6	PP_2770		conserved exported protein of unknown function	no	0.17
7	PP_0202		CBS domain-containing protein	no	0.17
8	PP_3258		conserved protein of unknown function	no	0.17
9	PP_3097		conserved protein of unknown function	0.35	0.16
10	PP_3348		GGDEF domain protein	no	0.16
11	PP_2532		conserved protein of unknown function	no	0.16
12	PP_1287		Glycosyltransferase alg8	no	0.16
13	PP_3245		conserved protein of unknown function	no	0.16
14	PP_2603		conserved protein of unknown function	no	0.16
15	PP_3730		Transcriptional regulatory protein AruR	no	0.16
16	PP_0662		putative Threonine synthase	no	0.16
17	PP_2524		HD domain protein	no	0.16
18	PP_3431		ThiJ/PfpI family protein	no	0.15
19	PP_2714		Sensor histidine kinase	no	0.15
20	PP_2892		conserved exported protein of unknown function	no	0.15

Or look for negative cofitness