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  • Top cofit genes for PP_3944 from Pseudomonas putida KT2440

    6-hydroxynicotinate 3-monooxygenase
    SEED: Salicylate hydroxylase (EC 1.14.13.1)
    KEGG: 6-hydroxynicotinate 3-monooxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3945 2,5-dihydroxypyridine 5,6-dioxygenase no 0.28
    2 PP_3948 nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) no 0.27
    3 PP_3943 N-formylmaleamate deformylase no 0.23
    4 PP_0625 Chaperone protein ClpB 0.47 0.17
    5 PP_5497 conserved protein of unknown function with rhs repeat-associated core domain no 0.17
    6 PP_3099 uricase/urate oxidase 0.39 0.15
    7 PP_3941 maleamate amidohydrolase 0.47 0.15
    8 PP_1688 Transcriptional regulator, LysR family no 0.15
    9 PP_2916 riboflavin synthase no 0.14
    10 PP_3254 putative Nucleosidase no 0.14
    11 PP_0114 methionine ABC transporter ATP-binding protein 0.24 0.14
    12 PP_5262 Probable multidrug resistance protein NorM no 0.14
    13 PP_5322 putative metal ion transporter no 0.14
    14 PP_3234 Heat shock protein, HSP20 family no 0.13
    15 PP_1301 quality control serine endoprotease DegS no 0.13
    16 PP_4803 D-alanyl-D-alanine carboxypeptidase no 0.13
    17 PP_0824 phosphonate transport system-binding protein no 0.13
    18 PP_3222 ABC transporter, permease protein no 0.13
    19 PP_0204 Transcriptional regulator, GntR family no 0.12
    20 PP_1480 conserved protein of unknown function no 0.12

    Or look for negative cofitness