Top cofit genes for PP_3940 from Pseudomonas putida KT2440

Putative metabolite transport protein NicT
SEED: Nitrate/nitrite transporter

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3945		2,5-dihydroxypyridine 5,6-dioxygenase	no	0.21
2	PP_1480		conserved protein of unknown function	no	0.17
3	PP_4997		pyrimidine operon regulatory protein/uracil phosphoribosyltransferase	no	0.15
4	PP_2599		Chemotaxis sensory transducer family protein	no	0.15
5	PP_2319		conserved protein of unknown function	no	0.15
6	PP_2881		Oxidoreductase, short chain dehydrogenase/reductase family	no	0.15
7	PP_4510		conserved protein of unknown function	0.13	0.15
8	PP_4094		conserved protein of unknown function	no	0.14
9	PP_4540		Hydrolase, alpha/beta fold family	no	0.14
10	PP_2423		Fe(2+)/alpha-ketoglutarate-dependent dioxygenase	0.24	0.14
11	PP_4526		putative MFS superfamily transporter precursor	no	0.14
12	PP_4859		Transcriptional regulator, TetR family	no	0.14
13	PP_4868		Nicotinate phosphoribosyltransferase	no	0.13
14	PP_0216		putative sensory box/GGDEF family protein	no	0.13
15	PP_1228		Methyl-accepting chemotaxis transducer	no	0.13
16	PP_0566		translation-related factor	0.51	0.13
17	PP_3098		conserved protein of unknown function	no	0.13
18	PP_4527		putative permease of the drug/metabolite transporter (DMT) superfamily	0.44	0.13
19	PP_3343		nickel ABC transporter permease subunit	no	0.13
20	PP_4032		putative Outer membrane lipoprotein Blc	no	0.13

Or look for negative cofitness