Top cofit genes for PP_3934 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Cyn operon transcriptional activator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2449		conserved protein of unknown function	no	0.22
2	PP_1504		conserved protein of unknown function	no	0.21
3	PP_2319		conserved protein of unknown function	no	0.21
4	PP_2363		conserved protein of unknown function	0.18	0.20
5	PP_3337		conserved membrane protein of unknown function	no	0.20
6	PP_2160		NADPH-dependent 7-cyano-7-deazaguanine reductase	no	0.20
7	PP_1445		carbohydrate-selective porin	0.18	0.19
8	PP_5483		conserved protein of unknown function	no	0.18
9	PP_3733		putative ABC transporter lipoprotein	0.23	0.18
10	PP_5337		LysR family transcriptional regulator	no	0.18
11	PP_3463		phenylacetaldehyde dehydrogenase	no	0.17
12	PP_4918		conserved protein of unknown function	no	0.17
13	PP_2058		putative Porin	no	0.17
14	PP_2025		Exonuclease SbcD	no	0.17
15	PP_1087		Outer membrane protein, OmpA family	no	0.17
16	PP_2641		Iron-sulfur cluster-binding protein	no	0.17
17	PP_2210		LysR family transcriptional regulator	no	0.17
18	PP_1909		putative septum formation protein	no	0.16
19	PP_3751		putative Cyanate transporter	no	0.16
20	PP_4769		conserved protein of unknown function	no	0.16

Or look for negative cofitness