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Cofit
Protein
Homologs
Top cofit genes for PP_3900 from
Pseudomonas putida KT2440
hypothetical protein
SEED: hicA protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1063
DNA-binding transcriptional regulator, homocysteine-binding
0.14
0.20
2
PP
_5261
Transcriptional regulator, LysR family
no
0.19
3
PP
_1348
putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase
no
0.18
4
PP
_5669
ABC transporter related
no
0.18
5
PP
_2017
aminopeptidase N
no
0.18
6
PP
_4109
conserved protein of unknown function
no
0.17
7
PP
_4684
conserved protein of unknown function with kinase-like domain
no
0.17
8
PP
_3790
diaminopimelate epimerase
no
0.17
9
PP
_3788
putative Non-ribosomal peptide synthetase
no
0.17
10
PP
_1369
conserved protein of unknown function
no
0.17
11
PP
_1067
Sensor histidine kinase
no
0.17
12
PP
_4647
transcriptional regulator, LuxR family
no
0.16
13
PP
_2399
conserved protein of unknown function
no
0.16
14
PP
_2811
conserved exported protein of unknown function
no
0.16
15
PP
_3244
Magnesium transporter, MgtC family
no
0.16
16
PP
_2489
putative Xenobiotic reductase
no
0.16
17
PP
_3017
O6-methylguanine-DNA methyltransferase
no
0.16
18
PP
_1233
sulfurtransferase
no
0.16
19
PP
_5472
conserved exported protein of unknown function
no
0.16
20
PP
_5658
protein of unknown function
no
0.15
Or look for
negative cofitness