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  • Top cofit genes for PP_3899 from Pseudomonas putida KT2440

    conserved protein of unknown function, hicB family
    SEED: hicB protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5025 Glucans biosynthesis glucosyltransferase H no 0.20
    2 PP_1498 putative Lipoprotein no 0.18
    3 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) no 0.17
    4 PP_4880 exoribonuclease R 0.46 0.17
    5 PP_5502 ribosome modulation factor no 0.17
    6 PP_5239 putative ATP-dependent chelatase no 0.17
    7 PP_4250 cytochrome c oxidase subunit I, cbb3-type 0.20 0.16
    8 PP_5026 Glucans biosynthesis protein G no 0.16
    9 PP_1550 Transcriptional regulator, Cro/CI family no 0.16
    10 PP_4942 conserved protein of unknown function no 0.16
    11 PP_2475 Transcriptional regulator, TetR family no 0.16
    12 PP_3109 conserved protein of unknown function no 0.16
    13 PP_0951 Ribosome hibernation promoting factor no 0.15
    14 PP_3128 putative Exopolysaccharide biosynthesis/transport protein no 0.15
    15 PP_0489 formate dehydrogenase-O major subunit no 0.15
    16 PP_4286 allantoinase no 0.15
    17 PP_3924 conserved protein of unknown function no 0.15
    18 PP_4722 Transcription elongation factor GreA 0.23 0.15
    19 PP_0125 putative cytochrome c-type protein no 0.15
    20 PP_4475 succinylglutamate desuccinylase no 0.15

    Or look for negative cofitness