Top cofit genes for PP_3879 from Pseudomonas putida KT2440

Phage portal protein, HK97 family
SEED: Phage portal protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_5407		Transposition protein, TnsD-related protein	no	0.19
2	PP_3784		conserved protein of unknown function	no	0.19
3	PP_3664		CDP-diacylglycerol--serine O-phosphatidyltransferase	no	0.19
4	PP_4371		two component system AtoC DNA-binding transcriptional activator	no	0.18
5	PP_2360		putative type 1 pili subunit CsuA/B protein	no	0.18
6	PP_4331		conserved protein of unknown function	no	0.18
7	PP_5SB		5S ribosomal RNA	no	0.18
8	PP_4647		transcriptional regulator, LuxR family	no	0.18
9	PP_4111		Elongation factor G 2	no	0.18
10	PP_5473		putative transcriptional regulator, LuxR family	no	0.17
11	PP_3509		Glyoxalase family protein	no	0.17
12	PP_5384		copper sensor protein	no	0.17
13	PP_3931		putative transporter	no	0.17
14	PP_0506		putative ABC efflux transporter, permease protein	no	0.17
15	PP_2882		putative 2-hydroxychromene-2-carboxylate isomerase	no	0.16
16	PP_0572		peptidoglycan glycosyltransferase	no	0.16
17	PP_1009		glyceraldehyde-3-phosphate dehydrogenase	no	0.16
18	PP_1518		conserved exported protein of unknown function	no	0.16
19	PP_5637		conserved protein of unknown function	no	0.16
20	PP_0035		putative bactoprenol-linked glycose transferase	no	0.16

Or look for negative cofitness