Top cofit genes for PP_3878 from Pseudomonas putida KT2440

putative Phage minor capsid protein C
SEED: phage minor capsid protein C, putative

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1063		DNA-binding transcriptional regulator, homocysteine-binding	no	0.27
2	PP_2494		conserved protein of unknown function	no	0.21
3	PP_0375		Prolyl oligopeptidase family protein	no	0.20
4	PP_4118		putative Membrane protein	no	0.20
5	PP_4690		Rieske 2Fe-2S family protein	no	0.20
6	PP_2279		Head-to-tail joining protein	no	0.19
7	PP_5402		deacetylase of acetyl-CoA synthetase, NAD-dependent	no	0.19
8	PP_0506		putative ABC efflux transporter, permease protein	no	0.18
9	PP_2714		Sensor histidine kinase	no	0.18
10	PP_2689		putative Endoribonuclease	no	0.18
11	PP_0270		Sensor histidine kinase	no	0.17
12	PP_0096		oligopeptidase A	no	0.17
13	PP_4421		putative aminotransferase	no	0.17
14	PP_2016		conserved protein of unknown function	no	0.17
15	PP_1253		Transcriptional regulator, ArsR family	no	0.16
16	PP_1573		putative Major tail protein	no	0.16
17	PP_3443		putative glyceraldehyde-3-phosphate dehydrogenase	no	0.16
18	PP_0242		Transcriptional regulator, TetR family	no	0.16
19	PP_4632		dihydrofolate reductase / dihydromonapterin reductase	no	0.16
20	PP_0482		bacterioferritin	no	0.16

Or look for negative cofitness