Top cofit genes for PP_3871 from Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG111678: IS, phage, Tn; Transposon-related functions

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3734		putative ABC transporter, permease protein	no	0.18
2	PP_2769		putative Branched-chain amino acid ABC transporter, permease protein	no	0.17
3	PP_5344		Acetyltransferase	no	0.17
4	PP_2167		putative PhoD-like phosphatase	no	0.16
5	PP_3359		putative Hydroxycinnamic acid degradation regulator	no	0.16
6	PP_3862		putative Phage assembly protein	no	0.16
7	PP_2405		conserved exported protein of unknown function	no	0.16
8	PP_4051		malto-oligosyltrehalose trehalohydrolase	no	0.15
9	PP_2083		putative Lipase	no	0.15
10	PP_4371		two component system AtoC DNA-binding transcriptional activator	0.55	0.15
11	PP_2455		ribose ABC transporter - ATP-binding subunit	no	0.15
12	PP_3822		Cytochrome c family protein	no	0.15
13	PP_4332		Chemotaxis protein CheW	0.20	0.15
14	PP_2922		Urea amidolyase-related protein	no	0.15
15	PP_3355		Beta-ketothiolase	no	0.15
16	PP_2815		conserved protein of unknown function	no	0.15
17	PP_2840		putative Membrane protein	no	0.15
18	PP_4338		Chemotaxis histidine kinase CheA	0.27	0.15
19	PP_3639		Alkylhydroperoxidase AhpD domain protein	no	0.15
20	PP_4052		4-alpha-glucanotransferase	0.35	0.15

Or look for negative cofitness