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  • Top cofit genes for PP_3862 from Pseudomonas putida KT2440

    putative Phage assembly protein
    SEED: Prophage baseplate assembly protein V

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4332 Chemotaxis protein CheW 0.24 0.22
    2 PP_3182 GGDEF domain protein no 0.21
    3 PP_2883 conserved protein of unknown function no 0.20
    4 PP_3916 conserved protein of unknown function no 0.18
    5 PP_0022 hypothetical protein no 0.18
    6 PP_1049 putative protein secretion protein for export no 0.18
    7 PP_2147 conserved exported protein of unknown function no 0.18
    8 PP_3297 conserved protein of unknown function no 0.18
    9 PP_1396 conserved protein of unknown function no 0.17
    10 PP_4334 ParA family protein no 0.17
    11 PP_4212 pyoverdine biosynthesis related protein no 0.17
    12 PP_3333 conserved protein of unknown function no 0.17
    13 PP_3225 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.16
    14 PP_4392 chemotaxis protein methyltransferase 0.26 0.16
    15 PP_4335 flagellar motor protein no 0.16
    16 PP_3648 Carboxymuconolactone decarboxylase family protein 0.21 0.16
    17 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase no 0.16
    18 PP_3871 conserved protein of unknown function no 0.16
    19 PP_3655 Cytosine/purine/uracil/thiamine/allantoin permease family protein no 0.16
    20 PP_4367 Flagellar assembly protein FliH no 0.16

    Or look for negative cofitness