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  • Top cofit genes for PP_3852 from Pseudomonas putida KT2440

    conserved protein of unknown function with BNR domain
    SEED: Sialidase (EC 3.2.1.18)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2455 ribose ABC transporter - ATP-binding subunit no 0.23
    2 PP_3803 putative Cation ABC transporter, permease protein no 0.20
    3 PP_2144 Transcriptional regulator, TetR family no 0.19
    4 PP_5622 conserved protein of unknown function no 0.19
    5 PP_5464 protein of unknown function no 0.19
    6 PP_2656 phosphate ABC transporter no 0.19
    7 PP_2473 conserved protein of unknown function no 0.18
    8 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor no 0.18
    9 PP_4100 Transcriptional regulator, Cro/CI family no 0.17
    10 PP_4964 D-erythrose 4-phosphate dehydrogenase no 0.17
    11 PP_4896 DNA mismatch repair protein MutL no 0.17
    12 PP_2389 conserved protein of unknown function no 0.17
    13 PP_3680 conserved protein of unknown function no 0.17
    14 PP_2387 conserved protein of unknown function no 0.17
    15 PP_4804 RlpA-like lipoprotein no 0.16
    16 PP_3681 putative Helicase no 0.16
    17 PP_1049 putative protein secretion protein for export no 0.16
    18 PP_0280 Amino acid ABC transporter, permease protein no 0.16
    19 PP_3383 gluconate 2-dehydrogenase flavoprotein subunit no 0.16
    20 PP_3860 Phage FluMu protein gp47 no 0.16

    Or look for negative cofitness