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  • Top cofit genes for PP_3834 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Circadian clock protein KaiC
    KEGG: circadian clock protein KaiC

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3833 Response regulator no 0.44
    2 PP_3484 Response regulator receiver protein no 0.32
    3 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) no 0.31
    4 PP_5502 ribosome modulation factor no 0.30
    5 PP_0951 Ribosome hibernation promoting factor no 0.30
    6 PP_2862 Undecaprenyl-diphosphatase no 0.28
    7 PP_0760 conserved membrane protein of unknown function no 0.28
    8 PP_1860 Organic hydroperoxide resistance transcriptional regulator no 0.26
    9 PP_0823 Selenide, water dikinase no 0.26
    10 PP_4332 Chemotaxis protein CheW 0.40 0.26
    11 PP_0397 protein kinase no 0.26
    12 PP_0396 conserved protein of unknown function no 0.25
    13 PP_1295 ATP-dependent RNA helicase RhlB no 0.25
    14 PP_0395 putative type IV piliation protein no 0.24
    15 PP_4994 conserved protein of unknown function no 0.24
    16 PP_4131 NADH-quinone oxidoreductase subunit N no 0.24
    17 PP_4058 1,4-alpha-glucan branching enzyme no 0.23
    18 PP_1318 Cytochrome b no 0.23
    19 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.43 0.23
    20 PP_5263 GGDEF domain protein no 0.23

    Or look for negative cofitness