Top cofit genes for PP_3833 from Pseudomonas putida KT2440

Response regulator
SEED: Signal transduction histidine kinase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0951		Ribosome hibernation promoting factor	no	0.46
2	PP_3834		conserved protein of unknown function	no	0.44
3	PP_2862		Undecaprenyl-diphosphatase	0.32	0.42
4	PP_3484		Response regulator receiver protein	no	0.39
5	PP_0396		conserved protein of unknown function	no	0.39
6	PP_4058		1,4-alpha-glucan branching enzyme	no	0.38
7	PP_0397		protein kinase	no	0.37
8	PP_0395		putative type IV piliation protein	no	0.37
9	PP_5502		ribosome modulation factor	no	0.36
10	PP_1198		transcriptional regulator, Cro/CI family (higA antitoxin like)	no	0.35
11	PP_1860		Organic hydroperoxide resistance transcriptional regulator	no	0.35
12	PP_5294		Ribonuclease PH	no	0.33
13	PP_1318		Cytochrome b	no	0.33
14	PP_4337		chemotaxis response regulator protein-glutamate methylesterase of group 1 operon	no	0.32
15	PP_2153		conserved protein of unknown function	no	0.32
16	PP_1319		Ubiquinol--cytochrome c reductase, cytochrome c1	no	0.31
17	PP_4143		conserved protein of unknown function	no	0.31
18	PP_0547		UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	no	0.30
19	PP_0823		Selenide, water dikinase	no	0.30
20	PP_3759		Methylesterase, CheB-like	no	0.30

Or look for negative cofitness