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  • Top cofit genes for PP_3817 from Pseudomonas putida KT2440

    Polyamine ABC transporter, ATP-binding protein
    SEED: ABC transporter ATP-binding protein
    KEGG: putative spermidine/putrescine transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5639 conserved exported protein of unknown function no 0.21
    2 PP_0357 ACT domain protein no 0.21
    3 PP_4696 Nitrogen regulation protein NR(I) no 0.20
    4 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily 0.24 0.20
    5 PP_5227 diaminopimelate decarboxylase no 0.19
    6 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.56 0.19
    7 PP_0083 tryptophan synthase beta chain no 0.19
    8 PP_0706 fused O(6)-alkylguanine DNA alkyltransferase - transcriptional activator no 0.18
    9 PP_0082 tryptophan synthase alpha chain no 0.18
    10 PP_1672 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase no 0.18
    11 PP_4219 non-ribosomal peptide synthetase no 0.18
    12 PP_2756 conserved protein of unknown function no 0.18
    13 PP_3208 Oxidoreductase, Pdr/VanB family no 0.18
    14 PP_3555 putative Transmembrane sensor no 0.17
    15 PP_3873 conserved protein of unknown function no 0.17
    16 PP_1022 glucose 6-phosphate-1-dehydrogenase no 0.17
    17 PP_1656 ATP:GTP 3'-pyrophosphotransferase no 0.17
    18 PP_1146 conserved exported protein of unknown function no 0.16
    19 PP_4520 conserved protein of unknown function no 0.16
    20 PP_1079 Ornithine carbamoyltransferase no 0.16

    Or look for negative cofitness