Top cofit genes for PP_3811 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3340		putative TonB-dependent receptor	no	0.19
2	PP_2026		conserved protein of unknown function	no	0.17
3	PP_3119		error-prone DNA polymerase	0.38	0.17
4	PP_3218		Monooxygenase, NtaA/SnaA/SoxA family	0.20	0.16
5	PP_2591		Ferric anguibactin-binding protein	no	0.16
6	PP_1730		Probable M18 family aminopeptidase 2	no	0.16
7	PP_1866		Phospho-2-dehydro-3-deoxyheptonate aldolase	0.23	0.16
8	PP_5497		conserved protein of unknown function with rhs repeat-associated core domain	no	0.15
9	PP_0244		conserved protein of unknown function	0.14	0.15
10	PP_2534		Transcriptional regulator, LysR family	no	0.15
11	PP_4162		conserved membrane protein of unknown function	0.52	0.15
12	PP_3547		putative NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain	no	0.15
13	PP_1301		quality control serine endoprotease DegS	no	0.15
14	PP_0508		conserved exported protein of unknown function	no	0.15
15	PP_3527		Transcriptional regulator, TetR family	no	0.15
16	PP_1867		conserved protein of unknown function	0.20	0.14
17	PP_2759		ribose ABC transporter - ATP-binding subunit	0.62	0.14
18	PP_4311		putative D-amino acid dehydrogenase 2 small subunit	no	0.14
19	PP_3423		Type II secretion pathway protein XcpT	no	0.14
20	PP_2006		conserved membrane protein of unknown function	no	0.14

Or look for negative cofitness