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  • Top cofit genes for PP_3805 from Pseudomonas putida KT2440

    lipoprotein required for swarming
    SEED: Putative outer membrane lipoprotein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3254 putative Nucleosidase no 0.19
    2 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.66 0.16
    3 PP_2855 conserved exported protein of unknown function no 0.16
    4 PP_3736 vanillate O-demethylase oxygenase subunit 0.25 0.15
    5 PP_1378 alpha-ketoglutarate permease 0.21 0.15
    6 PP_1838 conserved membrane protein of unknown function 0.39 0.15
    7 PP_2098 D-alanyl-D-alanine carboxypeptidase no 0.15
    8 PP_3737 vanillate O-demethylase oxidoreductase 0.29 0.15
    9 PP_2689 putative Endoribonuclease no 0.14
    10 PP_1840 conserved protein of unknown function no 0.14
    11 PP_1224 periplasmic subunit of the TolQRA transport system no 0.14
    12 PP_4377 putative Flagellin FlaG no 0.14
    13 PP_2359 putative Type 1 pili subunit CsuA/B protein no 0.14
    14 PP_2125 lipid kinase no 0.14
    15 PP_2651 Major facilitator family transporter no 0.14
    16 PP_1730 Probable M18 family aminopeptidase 2 no 0.14
    17 PP_4222 putative SyrP protein no 0.14
    18 PP_3813 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II no 0.14
    19 PP_1065 membrane protein required for efficient alginate biosynthesis 0.22 0.14
    20 PP_2412 ParA family protein no 0.13

    Or look for negative cofitness