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  • Top cofit genes for PP_3798 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: FIG139991: Putative thiamine pyrophosphate-requiring enzyme

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3801 putative Cation ABC transporter, periplasmic cation-binding protein 0.74 0.31
    2 PP_0482 bacterioferritin 0.44 0.27
    3 PP_4210 pyoverdine efflux carrier and ATP binding protein 0.48 0.27
    4 PP_3803 putative Cation ABC transporter, permease protein 0.69 0.24
    5 PP_3797 conserved membrane protein of unknown function 0.85 0.24
    6 PP_4209 ABC export system, membrane fusion protein 0.27 0.23
    7 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase 0.18 0.21
    8 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily 0.41 0.20
    9 PP_2379 putative cytochrome oxidase biogenesis protein 0.44 0.20
    10 PP_4942 conserved protein of unknown function no 0.19
    11 PP_3799 conserved exported protein of unknown function 0.64 0.19
    12 PP_5209 conserved exported protein of unknown function 0.26 0.19
    13 PP_2348 Sensor histidine kinase no 0.18
    14 PP_1028 Transcriptional regulator, LysR family no 0.18
    15 PP_3802 putative Cation ABC transporter, ATP-binding protein 0.69 0.18
    16 PP_4944 Carbamoyltransferase no 0.18
    17 PP_5041 glycogen phosphorylase 0.36 0.17
    18 PP_3959 Voltage-gated chloride channel family protein no 0.17
    19 PP_3800 conserved protein of unknown function 0.71 0.17
    20 PP_4211 outer membrane pyoverdine efflux protein 0.31 0.17

    Or look for negative cofitness