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  • Top cofit genes for PP_3790 from Pseudomonas putida KT2440

    diaminopimelate epimerase
    SEED: Diaminopimelate epimerase (EC 5.1.1.7)
    KEGG: diaminopimelate epimerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3788 putative Non-ribosomal peptide synthetase no 0.82
    2 PP_3786 aminotransferase no 0.77
    3 PP_3787 conserved protein of unknown function no 0.75
    4 PP_3789 putative Efflux transporter no 0.75
    5 PP_4922 Phosphomethylpyrimidine synthase no 0.70
    6 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.68
    7 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase no 0.66
    8 PP_3776 putative permease (RarD protein) no 0.61
    9 PP_5104 thiazole synthase no 0.60
    10 PP_1109 Transcriptional regulator, GntR family no 0.56
    11 PP_3376 putative phosphonate dehydrogenase no 0.55
    12 PP_1110 serine acetyltransferase no 0.54
    13 PP_2388 Transporter, LysE family no 0.54
    14 PP_0506 putative ABC efflux transporter, permease protein no 0.53
    15 PP_1111 putative Synthetase no 0.53
    16 PP_4684 conserved protein of unknown function with kinase-like domain no 0.52
    17 PP_1233 sulfurtransferase no 0.49
    18 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase no 0.49
    19 PP_0420 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex no 0.49
    20 PP_2390 Transcriptional regulator, LysR family no 0.49

    Or look for negative cofitness